Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913492.1_cds_XP_016463531.1_56647
CDS Infomation

[gene=LOC107786555] [db_xref=GeneID:107786555] [protein=putative late blight resistance protein homolog R1B-17] [protein_id=XP_016463531.1] [location=join(4957..5289,5336..6091,6466..6540)] [gbkey=CDS]
Sequence

ATGGTTGGTTTTAGTGAAGAGACTGAAATGCTTATAGAGAAACTTGTGACAGGACATCGG
CAATTAGATGTGATCTCAATTTTTGGAATGCCAGGACTAGGAAAAACAACTTTGGCTAAG
AGATTGTATGATCATGAAGCTATTTCAAATCGCTTCTATATTCGCTTATGGTGTTGTTCT
TCCCAATCTTATGATAAGAGAGCTCTCTTGTTTGAATTATTGGGTCATATTTGTGAGCTT
GATGATATTACCAAAGAAAAAAGTGACGATGAGCTAGCTGAGAAGCTATACAGATATCTG
AAGGGAAAGCGGTACCTTATTGTTGTGGATGATATGATGATAAACGAAGTAGNTCATTTG
AAGTATTTGGAGCTGCGGCTGTATTCTAATTACATTCCGAATACAATATGTAACCTGAAG
GAGCTGGAGACATTTATAGTGACCGGAATCTATCGTAAAGCCTGCATCCCAAAATCCATT
TGGGATATGACAAGCTTGAGACATCTGCATATAAGTTGTCTATGTACCTCTCAACTATTA
GAGGATCTTAACAACATGAGAACATGTTCCGATCTGGTTATTTTTCCTGGGATGCATTAC
CAGAATTTTATGAAAAGATTACCCAATCTTGAAAAGCTCAGTTGTCAATTATATGGTTCA
GGAAAGTCATCTAGCAATTTCTTTCCTAGTTTTGACTCTCTCAGTCAACTAAACTCTCTC
AAGATTGATTTCTCTGGGGAATTGGTAGATCCCTATGGTTTTGAAGATTTTACATATCCA
TCAAACCTCAAGAAATTAACTTTAGCATGTCTTGAACTCCCCTGGAATAGAATCTTAATC
ATCGGCAGATTATCCAACCTTGAAGTTCTGAAACTAGAAGGAAATGCCTTCAGAGGGAAA
CAATGGGACGTTAAGGATGGGGAGTTTCCTAACCTTAAAGTTTTGAAATTAAAGGATCTA
CCAATATCAGAATGGACTGCCTCTGATGACTCGTTTCCCAACCTAGAGAAAGTACTTGTG
CGATGGTGTTGGAACCTAGAGGAAATCCCTGAAAGTTTTGGAAGCAAGTGTACGATGCAA
ATGATTGAGGAAATGCAAATTGAGGAGATGGGAAACTCTGAATTCAAGGTCAATATTTGG
ATTTGTGGAAGTCATGAGATTTGA

Peptide Sequence

PEP ID

XP_016463531.1
PEP Infomation

PREDICTED: putative late blight resistance protein homolog R1B-17 [Nicotiana tabacum]
Sequence

MVGFSEETEMLIEKLVTGHRQLDVISIFGMPGLGKTTLAKRLYDHEAISNRFYIRLWCCS
SQSYDKRALLFELLGHICELDDITKEKSDDELAEKLYRYLKGKRYLIVVDDMMINEVXHL
KYLELRLYSNYIPNTICNLKELETFIVTGIYRKACIPKSIWDMTSLRHLHISCLCTSQLL
EDLNNMRTCSDLVIFPGMHYQNFMKRLPNLEKLSCQLYGSGKSSSNFFPSFDSLSQLNSL
KIDFSGELVDPYGFEDFTYPSNLKKLTLACLELPWNRILIIGRLSNLEVLKLEGNAFRGK
QWDVKDGEFPNLKVLKLKDLPISEWTASDDSFPNLEKVLVRWCWNLEEIPESFGSKCTMQ
MIEEMQIEEMGNSEFKVNIWICGSHEI

Transcript Sequence

Gene sequence data has not been registered.